ZFIN ID: ZDB-GENE-030131-2913
Gene Name: arrestin domain containing 3a
Gene Symbol: arrdc3a    Nomenclature History

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Previous Names: arrdc3, si:dkey-172m14.3, wu:fc21e01, zgc:136956

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to be involved in protein transport. Predicted to localize to cytoplasm. Is expressed in liver. Orthologous to human ARRDC3 (arrestin domain containing 3).
Genome Resources: Alliance (1),  Gene:566685 (1),  Ensembl(GRCz11):ENSDARG00000052690 (2)
GENE EXPRESSION
All Expression Data: Fig. 5 from Tao et al., 2013
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6063 Point Mutation Unknown Premature Stop ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH arrdc3a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH arrdc3a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process protein transport (more)
Cellular Component cytoplasm (more)
Molecular Function molecular_function (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA arrdc3a-201 (1)    Ensembl 3583
ncRNA arrdc3a-002 (1)    Ensembl 765
arrdc3a-003 (1)    Ensembl 399
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM arrdc3a No data available
MARKER RELATIONSHIPS
arrdc3a Contained in: [BAC] DKEY-172M14 (1) (order this)
arrdc3a Encodes: [EST] fc21e01
[cDNA] MGC:136956 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001080029 (1) 3606 nt
Genomic GenBank:CR450818 (1) 150883 nt
Select Tool
Polypeptide UniProtKB:Q1ECU3 (1) 414 aa
Sequence Information (all 11)
ORTHOLOGY for arrdc3a ( Chr: 5 )
CITATIONS (18)