Gene

slitrk6

ID
ZDB-GENE-030131-2816
Name
SLIT and NTRK-like family, member 6
Symbol
slitrk6 Nomenclature History
Previous Names
  • wu:fc18f06
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Predicted to be involved in axonogenesis. Predicted to localize to integral component of membrane. Human ortholog(s) of this gene implicated in high myopia-sensorineural deafness syndrome. Is expressed in nervous system and otic vesicle. Orthologous to human SLITRK6 (SLIT and NTRK like family member 6).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
7 figures from Round et al., 2014
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With slitrk6 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
high myopia-sensorineural deafness syndrome Alliance Deafness and myopia 221200
Associated With slitrk6 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000483 Cysteine-rich flanking region, C-terminal
Family IPR043326 Slitrk family
Homologous_superfamily IPR032675 Leucine-rich repeat domain superfamily
Repeat IPR001611 Leucine-rich repeat
Repeat IPR003591 Leucine-rich repeat, typical subtype
Domain Details Per Protein
Protein Length Cysteine-rich flanking region, C-terminal Leucine-rich repeat Leucine-rich repeat domain superfamily Leucine-rich repeat, typical subtype Slitrk family
UniProtKB:Q503F6 539
UniProtKB:A0A0R4IS19 830
Transcripts
Genome Browsers
No data available
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations