ZFIN ID: ZDB-GENE-030131-2801
Gene Name: finTRIM family, member 56
Gene Symbol: ftr56    Nomenclature History

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Previous Names: fc18b09, si:dkey-263o22.3 (1), wu:fc18b09 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to have zinc ion binding activity.
Genome Resources: Alliance (1),  Gene:561680 (1),  Ensembl(GRCz11):ENSDARG00000030954 (2)
GENE EXPRESSION
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ftr56 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH ftr56 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Molecular Function metal ion binding (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Domain IPR000315 B-box-type zinc finger
Domain IPR001841 Zinc finger, RING-type
Domain IPR001870 B30.2/SPRY domain
Domain IPR003877 SPRY domain
Domain IPR003879 Butyrophylin-like, SPRY domain
Domain IPR006574 SPRY-associated
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Conserved_site IPR017907 Zinc finger, RING-type, conserved site
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA ftr56-201 (1)    Ensembl 2249
ncRNA ftr56-002 (1)    Ensembl 2116
Browsers: UCSCEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM ftr56 No data available
MARKER RELATIONSHIPS
ftr56 Contained in: [BAC] DKEY-263O22 (1) (order this)
ftr56 Encodes: [EST] fc18b09
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001044966 (1) 2249 bp
Genomic GenBank:BX294130 (1) 205973 bp Blast at MegaBLAST
Polypeptide UniProtKB:Q1LXS0 (1) 561 aa
Sequence Information (all 38)
ORTHOLOGY for ftr56 ( Chr: 19 )
CITATIONS (20)