ZFIN ID: ZDB-GENE-030131-2772
Gene Name: C1GALT1-specific chaperone 1
Gene Symbol: c1galt1c1    Nomenclature History

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Previous Names: fc59b02, wu:fc17f08, wu:fc59b02, zgc:66375

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to have glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity. Predicted to be involved in O-glycan processing, core 1. Human ortholog(s) of this gene implicated in Tn polyagglutination syndrome. Orthologous to several human genes including C1GALT1C1 (C1GALT1 specific chaperone 1).
Genome Resources: Alliance (1),  Gene:324052 (1),  Ensembl(GRCz11):ENSDARG00000036335 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6904671]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la018990Tg Transgenic Insertion Unknown Unknown DNA
PHENOTYPE No data available
DISEASE ASSOCIATED WITH c1galt1c1 HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Tn polyagglutination syndrome Alliance Tn polyagglutination syndrome, somatic 300622
DISEASE ASSOCIATED WITH c1galt1c1 VIA EXPERIMENTAL MODELS No data available
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA c1galt1c1-201 (1)    Ensembl 3458
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM c1galt1c1 No data available
MARKER RELATIONSHIPS
c1galt1c1 Contained in: [BAC] DKEY-15N5 (1) (order this)
c1galt1c1 Encodes: [EST] fc17f08, fc59b02, IMAGE:6904671 (1)
[cDNA] MGC:66375 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_199667 (1) 1223 nt
Genomic GenBank:BX004980 (1) 159333 nt
Select Tool
Polypeptide UniProtKB:E7FBK8 (1) 317 aa
Sequence Information (all 16)
ORTHOLOGY for c1galt1c1 ( Chr: 14 )
CITATIONS (22)