ZFIN ID: ZDB-GENE-030131-2694
Gene Name: general transcription factor IIA, 1
Gene Symbol: gtf2a1
Sequence Ontology ID : SO:0000704

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Previous Names: fc15h02, fj36b10, wu:fc15h02 (1), wu:fj36b10 (1), zgc:55847 (1)

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55847]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la013791Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH gtf2a1 HUMAN ORTHOLOG No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process transcription initiation from RNA polymerase II promoter (more)
    Cellular Component transcription factor TFIIA complex (more)
    Molecular Function CONTRIBUTES_TO transcription coactivator activity (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004855 (1)
  • InterPro:IPR009088 (1)
  • Pfam:PF03153 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA gtf2a1-001 (1) 2736
    ncRNA gtf2a1-002 (1) 699
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM gtf2a1 No data available
    MARKER RELATIONSHIPS
    gtf2a1Contained in: [BAC] DKEY-208J2 (order this)
    gtf2a1Encodes: [EST] fc15h02, fj36b10
    [cDNA] MGC:55847 (1) (order this), MGC:86907 (1) (order this), MGC:191372 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212657 (1) 2728bp
    Genomic GenBank:BX890568 (1) 188167bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IDL3 (1) 393aa
    Sequence Clusters UniGene:78440 (1)
    Sequence Information (all 25)
    OTHER gtf2a1 GENE PAGES
  • Alliance (1)
  • Gene:323974 (1)
  • VEGA:OTTDARG00000004669 (1)
  • Ensembl(GRCz10):ENSDARG00000011000 (1)
  • ORTHOLOGY for gtf2a1 (Chr: 20)
    CITATIONS (23)