ZFIN ID: ZDB-GENE-030131-2590
Gene Name: clathrin interactor 1a
Gene Symbol: clint1a    Nomenclature History

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Previous Names: clint1, enth (1), epn4 (1), enthoprotin, kiaa0171 (1), wu:fa05f05, wu:fb97f11, wu:fc12e09, zgc:103447

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to have clathrin binding activity and phospholipid binding activity. Involved in regulation of epidermis development. Predicted to localize to cytoplasmic vesicle; intracellular membrane-bounded organelle; and plasma membrane. Is expressed in epidermis and ventral fin fold. Orthologous to human CLINT1 (clathrin interactor 1).
Genome Resources: Alliance (1),  Gene:323870 (1),  Ensembl(GRCz11):ENSDARG00000025535 (2)
GENE EXPRESSION
All Expression Data: Fig. 1 from Dodd et al., 2009
Wild-type Stages, Structures: Pharyngula:Prim-25 (36.0h-42.0h) to Pharyngula:Prim-25 (36.0h-42.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi1520Tg Transgenic Insertion Intron 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • hi2558Tg Transgenic Insertion Intron 1 Unknown DNA
    sa42423 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-clint1a N/A 2
    MO2-clint1a N/A 2
    DISEASE ASSOCIATED WITH clint1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH clint1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of epidermis development (more)
    Cellular Component Golgi apparatus (more)
    Molecular Function clathrin binding (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA clint1a-201 (1)    Ensembl 742
    clint1a-202 (1)    Ensembl 3401
    clint1a-203 (1)    Ensembl 1673
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM clint1a No data available
    MARKER RELATIONSHIPS
    clint1a Contained in: [BAC] DKEY-147F20 (1) (order this)
    clint1a Contains: [SNP] rs3728655 (1), rs3728656 (1), rs3728657 (1), rs3728658 (1), rs3728659 (1), rs3728660 (1), rs3728661 (1)
    clint1a Encodes: [EST] fa05f05 (1), fb97f11, fc12e09
    [cDNA] MGC:103447 (1), MGC:173797 (1), MGC:193098 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001003412 (1) 2364 nt
    Genomic GenBank:CR626866 (1) 161413 nt
    Select Tool
    Polypeptide UniProtKB:A0A2R8QJD2 (1) 644 aa
    Sequence Information (all 28)
    ORTHOLOGY for clint1a ( Chr: 14 )
    CITATIONS (36)