ZFIN ID: ZDB-GENE-030131-2576
Gene Name: transglutaminase 2b
Gene Symbol: tgm2b
Sequence Ontology ID : SO:0000704

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Previous Names: fc12b04, wu:fc12b04, zgc:136700

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 6 figures (1 image) from Thisse et al., 2005 [eu541]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la015838Tg Transgenic Insertion Unknown Unknown DNA
sa40619 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tgm2b HUMAN ORTHOLOG No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process peptide cross-linking (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001102 (1)
  • InterPro:IPR002931 (1)
  • InterPro:IPR008958 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR014756 (1)
  • InterPro:IPR023608 (1)
  • InterPro:IPR036238 (1)
  • InterPro:IPR036985 (1)
  • Pfam:PF00868 (1)
  • Pfam:PF00927 (1)
  • Pfam:PF01841 (1)
  • EC:2.3.2.13 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tgm2b-001 (1) 1648
    ncRNA tgm2b-002 (1) 1366
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tgm2b No data available
    MARKER RELATIONSHIPS
    tgm2bContained in: [Fosmid] CH1073-441C13 (1) (order this)
    tgm2bEncodes: [EST] eu541 (1), fc12b04
    [cDNA] MGC:136700 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212656 (1) 2479bp
    Genomic GenBank:CU634004 (1) 34760bp
    Select Tool
    Polypeptide UniProtKB:Q1ECX3 (1) 679aa
    Sequence Clusters UniGene:16524 (1)
    Sequence Information (all 20)
    OTHER tgm2b GENE PAGES
  • Alliance (1)
  • Gene:323856 (1)
  • VEGA:OTTDARG00000034659 (1)
  • Ensembl(GRCz10):ENSDARG00000074094 (1)
  • ORTHOLOGY for tgm2b (Chr: 6)
    CITATIONS (24)