Gene

si:dkey-33c12.4

ID

ZDB-GENE-030131-2527

Name

si:dkey-33c12.4

Symbol

si:dkey-33c12.4 Nomenclature History

Previous Names

fc10f01
si:ch211-243o19.6 (1)
wu:fc10f01

Type

protein_coding_gene

Location

Chr: 13 Mapping Details/Browsers

Description

Predicted to have RNA binding activity and metal ion binding activity. Orthologous to human TTC31 (tetratricopeptide repeat domain 31).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With si:dkey-33c12.4 Human Ortholog

No data available

Associated With si:dkey-33c12.4 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000504	RNA recognition motif domain
Domain	IPR000571	Zinc finger, CCCH-type
Homologous_superfamily	IPR009060	UBA-like superfamily
Homologous_superfamily	IPR011990	Tetratricopeptide-like helical domain superfamily
Homologous_superfamily	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily	IPR035979	RNA-binding domain superfamily
Repeat	IPR019734	Tetratricopeptide repeat

Domain Details Per Protein

Protein	Length	Nucleotide-binding alpha-beta plait domain superfamily	RNA-binding domain superfamily	RNA recognition motif domain	Tetratricopeptide-like helical domain superfamily	Tetratricopeptide repeat	UBA-like superfamily	Zinc finger, CCCH-type
UniProtKB:B8A599 InterPro	631
UniProtKB:A0A8M9QFE8 InterPro	648

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	si:dkey-33c12.4-201 (1) Ensembl	Havana	2764 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	si:dkey-33c12.4-205 (1) Ensembl	Havana	524 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:dkey-33c12.4-002 (1) Ensembl	Havana	523 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:dkey-33c12.4-004 (1) Ensembl	Havana	367 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:dkey-33c12.4-005 (1) Ensembl	Havana	640 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:dkey-33c12.4-006 (1) Ensembl	Havana	422 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations