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ZIRC
ZFIN ID: ZDB-GENE-030131-2519
Gene Name: trinucleotide repeat containing adaptor 6A
Gene Symbol: tnrc6a
Sequence Ontology ID : SO:0001217

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Previous Name: wu:fc10d10

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have nucleic acid binding activity. Involved in negative regulation of translation and nuclear-transcribed mRNA poly(A) tail shortening. Predicted to localize to the P-body; RISC  ...
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1142 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa1542 Point Mutation Unknown Premature Stop ENU
    sa2112 Point Mutation Unknown Splice Site ENU
    sa15745 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20074 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tnrc6a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    ?Epilepsy, familial adult myoclonic, 6 618074
    DISEASE ASSOCIATED WITH tnrc6a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process negative regulation of translation (more)
    Cellular Component nucleoplasm (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 8)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA tnrc6a-002 (1) 314
    tnrc6a-003 (1) 785
    mRNA tnrc6a-201 (1) 10015
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tnrc6a No data available
    MARKER RELATIONSHIPS
    tnrc6a Contained in: [BAC] DKEY-18H21 (order this)
    tnrc6a Encodes: [EST] fc10d10
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NR_023338 (1) 449 bp
    Genomic GenBank:BX255942 (1) 203225 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0R4IJ26 (1) 1760 aa
    Sequence Clusters UniGene:162029 (1)
    Sequence Information (all 10)
    ORTHOLOGY for tnrc6a ( Chr: 3 )
    CITATIONS (19)