ZFIN ID: ZDB-GENE-030131-2519
Gene Name: trinucleotide repeat containing 6a
Gene Symbol: tnrc6a
Sequence Ontology ID : SO:0000704

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Previous Name: wu:fc10d10

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1142 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa1542 Point Mutation Unknown Premature Stop ENU
    sa2112 Point Mutation Unknown Splice Site ENU
    sa15745 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20074 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tnrc6a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    ?Epilepsy, familial adult myoclonic, 6 618074
    DISEASE ASSOCIATED WITH tnrc6a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process negative regulation of translation (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR012677 (1)
  • InterPro:IPR019486 (1)
  • InterPro:IPR032226 (1)
  • InterPro:IPR033501 (1)
  • InterPro:IPR034924 (1)
  • InterPro:IPR035979 (1)
  • Pfam:PF10427 (1)
  • Pfam:PF16608 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tnrc6a-001 (1) 10015
    ncRNA tnrc6a-002 (1) 314
    tnrc6a-003 (1) 785
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tnrc6a No data available
    MARKER RELATIONSHIPS
    tnrc6aContained in: [BAC] DKEY-18H21 (order this)
    tnrc6aEncodes: [EST] fc10d10
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NR_023338 (1) 449bp
    Genomic GenBank:BX255942 (1) 203225bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0R4IJ26 (1) 1760aa
    Sequence Clusters UniGene:162029 (1)
    Sequence Information (all 10)
    OTHER tnrc6a GENE PAGES
  • Alliance (1)
  • Gene:571871 (1)
  • VEGA:OTTDARG00000037530 (1)
  • Ensembl(GRCz11):ENSDARG00000079688 (2)
  • ORTHOLOGY for tnrc6a (Chr: 3)
    CITATIONS (18)