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General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-2281
Gene Name: collagen, type IV, alpha 5 (Alport syndrome)
Gene Symbol: col4a5
Sequence Ontology ID : SO:0000704

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Previous Names: dragnet (1), drg, wu:fc02g11

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have extracellular matrix structural constituent. Involved in basement membrane organization and cell morphogenesis. Predicted to localize to the extracellular matrix and extracellular  ...
DISEASE ASSOCIATED WITH col4a5 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
X-linked Alport syndrome Alport syndrome 1, X-linked 301050
DISEASE ASSOCIATED WITH col4a5 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process axon extension involved in axon guidance (more)
Cellular Component collagen trimer (more)
Molecular Function extracellular matrix structural constituent (more)
GO Terms (all 9)
TRANSCRIPTS
Type Name Length (bp) Analysis
ncRNA col4a5-002 (1) 714
mRNA col4a5-201 (1) 6451
GENE PRODUCT DESCRIPTION No description available
INTERACTIONS AND PATHWAYS
ANTIBODIESNo data available
PLASMIDSNo data available
CONSTRUCTS WITH SEQUENCES FROM col4a5 No data available
MARKER RELATIONSHIPS
col4a5Contained in: [BAC] CH211-34M5 (1) (order this), DKEY-249M16 (1) (order this)
col4a5Encodes: [EST] eu2431 (1), fc02g11, IMAGE:6960791
col4a5Has Artifact: [EST] fc12a01
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001123230 (1) 4980bp
Genomic GenBank:CR936978 (1) 75941bp
Select Tool
Polypeptide UniProtKB:B0UXF7 (1) 1679aa
Sequence Clusters UniGene:77841 (1)
Sequence Information (all 21)
ORTHOLOGY for col4a5 (Chr: 7)
CITATIONS (37)