Gene

ssb

ID
ZDB-GENE-030131-223
Name
small RNA binding exonuclease protection factor La
Symbol
ssb Nomenclature History
Previous Names
  • wu:fb17f11
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Predicted to have RNA binding activity. Predicted to be involved in RNA processing. Predicted to localize to nucleus and ribonucleoprotein complex. Is expressed in several structures, including digestive system; immature eye; mesoderm; musculature system; and nervous system. Orthologous to human SSB (small RNA binding exonuclease protection factor La).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
18 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ssb Human Ortholog
No data available
Associated With ssb Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Domain IPR006630 La-type HTH domain
Domain IPR014886 La protein, RNA-binding domain
Family IPR002344 Lupus La protein
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Homologous_superfamily IPR036388 Winged helix-like DNA-binding domain superfamily
Homologous_superfamily IPR036390 Winged helix DNA-binding domain superfamily
Domain Details Per Protein
Protein Length La protein, RNA-binding domain La-type HTH domain Lupus La protein Nucleotide-binding alpha-beta plait domain superfamily RNA-binding domain superfamily RNA recognition motif domain Winged helix DNA-binding domain superfamily Winged helix-like DNA-binding domain superfamily
UniProtKB:Q7ZTI0 401
Transcripts
Genome Browsers
No data available
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations