Gene

slc35c2

ID

ZDB-GENE-030131-2202

Name

solute carrier family 35 member C2

Symbol

slc35c2 Nomenclature History

Previous Names

wu:fb99e07 (1)
wu:fc49g11 (1)
wu:fi09e02 (1)
zgc:55285
zgc:77328 (1)

Type

protein_coding_gene

Location

Chr: 23 Mapping Details/Browsers

Description

Predicted to localize to collagen-containing extracellular matrix and extracellular space. Is expressed in neuromast. Orthologous to human SLC35C2 (solute carrier family 35 member C2).

Genome Resources

Note

None

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

No data available

Thisse Expression Data

MGC:55285 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With slc35c2 Human Ortholog

No data available

Associated With slc35c2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001791	Laminin G domain
Domain	IPR002035	von Willebrand factor, type A
Domain	IPR003961	Fibronectin type III
Domain	IPR004853	Sugar phosphate transporter domain
Homologous_superfamily	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036116	Fibronectin type III superfamily
Homologous_superfamily	IPR036465	von Willebrand factor A-like domain superfamily
Repeat	IPR008160	Collagen triple helix repeat

Domain Details Per Protein

Protein	Length	Collagen triple helix repeat	Concanavalin A-like lectin/glucanase domain superfamily	Fibronectin type III	Fibronectin type III superfamily	Immunoglobulin-like fold	Laminin G domain	Sugar phosphate transporter domain	von Willebrand factor A-like domain superfamily	von Willebrand factor, type A
UniProtKB:A0A2R8Q3Z3 InterPro	361
UniProtKB:E9QI71 InterPro	187
UniProtKB:E7EXF3 InterPro	1816
UniProtKB:F1R7R7 InterPro	362
UniProtKB:Q7ZW48 InterPro	362
UniProtKB:F1RCF3 InterPro	1897
UniProtKB:Q6NTI5 InterPro	1816
UniProtKB:F1Q5U3 InterPro	1897

Transcripts

Genome Browsers

Type	Name	Length (nt)	Analysis
mRNA	slc35c2-202 (1) Ensembl	2298 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	slc35c2-203 (1) Ensembl	7430 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	slc35c2-205 (1) Ensembl	838 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	slc35c2-004 (1) Ensembl	714 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Gene Tree: Ensembl

Citations