Gene

prdm1a

ID
ZDB-GENE-030131-2193
Name
PR domain containing 1a, with ZNF domain
Symbol
prdm1a Nomenclature History
Previous Names
  • nrd (1)
  • prdm1
  • Blimp-1 (1)
  • Blimp1 (1)
  • narrowminded (1)
  • U boot
  • u-boot (1)
  • ubo
  • wu:fb99c12
  • zgc:91885
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Exhibits DNA-binding transcription factor activity. Involved in several processes, including embryonic pectoral fin morphogenesis; positive regulation of cell differentiation; and skeletal system morphogenesis. Predicted to localize to cytoplasm and nucleus. Is expressed in several structures, including digestive system; ectoderm; fin bud; mesoderm; and nervous system. Orthologous to human PRDM1 (PR/SET domain 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
58 figures from 32 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
39 figures from 20 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With prdm1a Human Ortholog
No data available
Associated With prdm1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001214 SET domain
Domain IPR013087 Zinc finger C2H2-type
Domain IPR044413 PRDM1, PR/SET domain
Family IPR016608 PR domain zinc finger protein 1
Homologous_superfamily IPR036236 Zinc finger C2H2 superfamily
Homologous_superfamily IPR046341 SET domain superfamily
Domain Details Per Protein
Protein Length PRDM1, PR/SET domain PR domain zinc finger protein 1 SET domain SET domain superfamily Zinc finger C2H2 superfamily Zinc finger C2H2-type
UniProtKB:Q68EH4 776
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations