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ZIRC
ZFIN ID: ZDB-GENE-030131-2140
Gene Name: SET domain containing 2, histone lysine methyltransferase
Gene Symbol: setd2
Sequence Ontology ID : SO:0000704

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Previous Names: fb97h09, wu:fb97h09 (1)

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have histone-lysine N-methyltransferase activity. Predicted to be involved in histone lysine methylation and regulation of transcription, DNA-templated. Predicted to localize to the  ...
GENE EXPRESSION
All Expression Data: 2 figures from Sun et al., 2008
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH setd2 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Luscan-Lumish syndrome 616831
DISEASE ASSOCIATED WITH setd2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process histone lysine methylation (more)
Cellular Component chromosome (more)
Molecular Function histone-lysine N-methyltransferase activity (more)
GO Terms (all 5)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA setd2-201 (1) 9903
 Withdrawn Transcriptsextinct
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIESNo data available
PLASMIDSNo data available
CONSTRUCTS WITH SEQUENCES FROM setd2 No data available
MARKER RELATIONSHIPS
setd2Contained in: [BAC] CH211-193P21 (order this), DKEY-43F15 (1) (order this)
setd2Contains: [SNP] rs3728778, rs3728779 (1), rs3728780 (1), rs3728781 (1)
setd2Encodes: [EST] fb97h09
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:XM_009292184 (1)
Genomic GenBank:CU138519 (1) 146595bp
Select Tool
Polypeptide UniProtKB:F1QJI9 (1) 2737aa
Sequence Clusters UniGene:162278 (1)
Sequence Information (all 29)
ORTHOLOGY for setd2 (Chr: 16)
CITATIONS (22)