ZFIN ID: ZDB-GENE-030131-2046
Gene Name: TLC domain containing 3Ba
Gene Symbol: tlcd3ba    Nomenclature History

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Previous Names: fam57ba, fb95d07, wu:fb95d07, zgc:73225

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Involved in several processes, including central nervous system development; eye development; and lipid homeostasis. Predicted to localize to integral component of membrane. Is expressed in brain; central nervous system; epiphysis; head; and neurons. Orthologous to human TLCD3B (TLC domain containing 3B).
Genome Resources: Alliance (1),  Gene:323326 (1),  Ensembl(GRCz11):ENSDARG00000026875 (2)
GENE EXPRESSION
All Expression Data: 7 figures from 3 publications
Directly Submitted Expression Data: 4 figures (8 images) from Thisse et al., 2004 [MGC:73225]
Wild-type Stages, Structures: Blastula:256-cell (2.5h-2.75h) to Larval:Days 7-13 (168.0h-14d, 4.5mm, 8 teeth)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa2099 Point Mutation Unknown Premature Stop ENU
sa40047 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • wi720 Small Deletion Unknown Unknown TALEN
    Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-tlcd3ba N/A 2
    TALEN1-tlcd3ba 1
    DISEASE ASSOCIATED WITH tlcd3ba HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tlcd3ba VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process multicellular organism growth (more)
    Cellular Component integral component of membrane (more)
    Molecular Function molecular_function (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA fam57ba-202 (1)    Ensembl 745
    fam57ba-203 (1)    Ensembl 923
    fam57ba-204 (1)    Ensembl 886
    fam57ba-205 (1)    Ensembl 911
    fam57ba-206 (1)    Ensembl 891
    fam57ba-208 (1)    Ensembl 1382
    ncRNA fam57ba-007 (1)    Ensembl 680
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tlcd3ba No data available
    MARKER RELATIONSHIPS
    tlcd3ba Contained in: [BAC] DKEY-22A24 (1) (order this), DKEY-84K19 (1) (order this)
    tlcd3ba Encodes: [EST] fb95d07
    [cDNA] MGC:73225 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_199637 (1) 1161 nt
    Genomic GenBank:BX936284 (1) 224666 nt Blast at MegaBLAST
    Polypeptide UniProtKB:F1QF55 (1) 292 aa
    Sequence Information (all 43)
    ORTHOLOGY for tlcd3ba ( Chr: 3 )
    CITATIONS (21)