ZFIN ID: ZDB-GENE-030131-1928
Gene Name: transmembrane protein 39A
Gene Symbol: tmem39a
Sequence Ontology ID : SO:0000704

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Previous Names: fb92e03, wu:fb92e03, zgc:65781, zgc:77444 (1)

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(Including Attributions)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to localize to the integral component of membrane; orthologous to human TMEM39A (transmembrane protein 39A).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:77444]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la028196Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tmem39a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tmem39a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component integral component of membrane (more)
    Molecular Function molecular_function (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR019397 (1)
  • Pfam:PF10271 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA tmem39a-004 (1) 493
    tmem39a-005 (1) 807
    mRNA tmem39a-201 (1) 521
    tmem39a-202 (1) 905
    aberrant processed transcript tmem39a-203 (1) 411
    mRNA tmem39a-204 (1) 2207
    tmem39a-205 (1) 196
    tmem39a-208 (1) 1472
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tmem39a No data available
    MARKER RELATIONSHIPS
    tmem39aContained in: [Fosmid] ZFOS-1011F11 (1), ZFOS-1597F10 (1)
    tmem39aEncodes: [EST] fb92e03
    [cDNA] MGC:65781 (1) (order this), MGC:77444 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199632 (1) 2199bp
    Genomic GenBank:CU651657 (1) 44124bp
    Select Tool
    Polypeptide UniProtKB:F1QZE4 (1) 481aa
    Sequence Clusters UniGene:77580 (1)
    Sequence Information (all 25)
    OTHER tmem39a GENE PAGES
  • Alliance (1)
  • Gene:323208 (1)
  • VEGA:OTTDARG00000032471 (1)
  • Ensembl(GRCz11):ENSDARG00000102746 (1)
  • ORTHOLOGY for tmem39a (Chr: 1)
    CITATIONS (19)