ZFIN ID: ZDB-GENE-030131-1735
Gene Name: calcineurin binding protein 1
Gene Symbol: cabin1
Sequence Ontology ID : SO:0000704

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Previous Names: fb79a07, sb:eu2483, si:ch211-53f16.1, wu:fb79a07

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to contribute to nucleosome binding activity; predicted to be involved in DNA replication-independent nucleosome assembly; predicted to localize to the nucleus; orthologous to human CABIN1  ...
GENE EXPRESSION
All Expression Data: 5 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2005 [eu2483]
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa7162 Point Mutation Unknown Premature Stop ENU
sa18932 Point Mutation Unknown Splice Site ENU
sa21396 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34512 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41305 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41306 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cabin1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cabin1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process DNA replication-independent nucleosome assembly (more)
    Cellular Component nucleus (more)
    Molecular Function CONTRIBUTES_TO nucleosome binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011990 (1)
  • InterPro:IPR013026 (1)
  • InterPro:IPR015134 (1)
  • InterPro:IPR019734 (1)
  • InterPro:IPR033053 (1)
  • PROSITE:PS50293 (1)
  • Pfam:PF09047 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cabin1-001 (1) 3920
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cabin1 No data available
    MARKER RELATIONSHIPS
    cabin1Contained in: [BAC] CH73-197O15 (1) (order this), CH211-53F16 (1) (order this)
    cabin1Encodes: [EST] eu2483 (1), fb79a07
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001245969 (1) 7785bp
    Genomic GenBank:CU459194 (1) 101559bp
    Select Tool
    Polypeptide UniProtKB:F1Q598 (1) 2200aa
    Sequence Clusters UniGene:156164 (1)
    Sequence Information (all 34)
    OTHER cabin1 GENE PAGES
  • Alliance (1)
  • Gene:571383 (1)
  • VEGA:OTTDARG00000028937 (1)
  • Ensembl(GRCz11):ENSDARG00000079326 (2)
  • ORTHOLOGY for cabin1 (Chr: 8)
    CITATIONS (12)