header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-1435
Gene Name: dihydrouridine synthase 1-like (S. cerevisiae)
Gene Symbol: dus1l    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: wu:fb71f06, zgc:63748

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have tRNA dihydrouridine synthase activity. Predicted to be involved in oxidation-reduction process and tRNA processing. Orthologous to human DUS1L (dihydrouridine synthase 1 like).
Genome Resources: Alliance (1),  Gene:322715 (1),  Ensembl(GRCz11):ENSDARG00000089260 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63748]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa31344 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH dus1l HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH dus1l VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process oxidation-reduction process (more)
    Cellular Component cellular_component (more)
    Molecular Function catalytic activity (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001269 (1)
  • InterPro:IPR013785 (1)
  • InterPro:IPR035587 (1)
  • Pfam:PF01207 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA dus1l-201 (1)    Ensembl 2062
    ncRNA dus1l-002 (1)    Ensembl 629
    dus1l-003 (1)    Ensembl 795
    dus1l-004 (1)    Ensembl 903
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM dus1l No data available
    MARKER RELATIONSHIPS
    dus1l Contained in: [BAC] CH211-117C2 (1) (order this), CH211-234H8 (1) (order this)
    dus1l Encodes: [EST] fb71f06
    [cDNA] MGC:63748 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199617 (1) 2114 bp
    Genomic GenBank:BX897685 (1) 179286 bp
    Select Tool
    Polypeptide UniProtKB:B0S7L0 (1) 496 aa
    Sequence Clusters UniGene:75369 (1)
    Sequence Information (all 18)
    ORTHOLOGY for dus1l ( Chr: 3 )
    CITATIONS (19)