ZFIN ID: ZDB-GENE-030131-139
Gene Name: RAB5A, member RAS oncogene family, a
Gene Symbol: rab5aa
Sequence Ontology ID : SO:0000704

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Previous Names: rab5a, fj38g08 (1), hm:zehn1144, wu:fj38g08 (1)

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have GTPase activity; predicted to be involved in Rab protein signal transduction, intracellular protein transport, and regulation of endocytosis; predicted to localize to the early  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56009]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa17878 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rab5aa HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rab5aa VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of endocytosis (more)
    Cellular Component early endosome (more)
    Molecular Function GTPase activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001806 (1)
  • InterPro:IPR005225 (1)
  • InterPro:IPR027417 (1)
  • Pfam:PF00071 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rab5aa-001 (1) 2592
    ncRNA rab5aa-002 (1) 691
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM rab5aa No data available
    MARKER RELATIONSHIPS
    rab5aaContained in: [BAC] CH211-1J13 (1) (order this)
    rab5aaEncodes: [EST] fj38g08, zehn1144
    [cDNA] MGC:56009 (1) (order this), MGC:77676 (1) (order this), MGC:193003 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201485 (1) 2408bp
    Genomic GenBank:BX950869 (1) 91362bp
    Select Tool
    Polypeptide UniProtKB:B2GTJ4 (1) 216aa
    Sequence Clusters UniGene:7401 (1)
    Sequence Information (all 22)
    OTHER rab5aa GENE PAGES
  • Alliance (1)
  • Gene:337737 (1)
  • VEGA:OTTDARG00000017072 (1)
  • Ensembl(GRCz11):ENSDARG00000018602 (2)
  • ORTHOLOGY for rab5aa (Chr: 19)
    CITATIONS (30)