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General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-1380
Gene Name: ureidopropionase, beta
Gene Symbol: upb1
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fb69e03, zgc:64020

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have beta-ureidopropionase activity. Predicted to be involved in beta-alanine biosynthetic process via 3-ureidopropionate. Orthologous to human UPB1 (beta-ureidopropionase 1).
GENE EXPRESSION
Directly Submitted Expression Data: 5 figures (6 images) from Thisse et al., 2004 [MGC:64020]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa16230 Point Mutation Unknown Missense, Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41240 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH upb1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Beta-ureidopropionase deficiency 613161
    DISEASE ASSOCIATED WITH upb1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process nitrogen compound metabolic process (more)
    Molecular Function beta-ureidopropionase activity (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003010 (1)
  • InterPro:IPR036526 (1)
  • PROSITE:PS50263 (1)
  • Pfam:PF00795 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA upb1-201 (1) 1367
    upb1-202 (1) 840
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM upb1 No data available
    MARKER RELATIONSHIPS
    upb1Contained in: [BAC] DKEY-36E17 (1) (order this)
    upb1Encodes: [EST] fb69e03
    [cDNA] MGC:64020 (1) (order this), MGC:191880 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199616 (1) 1378bp
    Genomic GenBank:CR848681 (1) 87949bp
    Select Tool
    Polypeptide UniProtKB:B0V1I3 (1) 384aa
    Sequence Clusters UniGene:77306 (1)
    Sequence Information (all 17)
    ORTHOLOGY for upb1 (Chr: 8)
    CITATIONS (18)