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ZIRC
ZFIN ID: ZDB-GENE-030131-1348
Gene Name: NPR3-like, GATOR1 complex subunit
Gene Symbol: nprl3
Sequence Ontology ID : SO:0001217

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Previous Names: fb68d06, sb:eu985, si:ch211-5k11.11, si:xx-187g17.8 (1), si:xx-by187g17.8 (1), wu:fb68d06 (1), zgc:136620

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in several processes, including TORC1 signaling; negative regulation of TOR signaling; and regulation of autophagosome assembly. Predicted to localize to the GATOR1 complex.  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2005 [eu985]
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6921 Point Mutation Unknown Premature Stop ENU
sa20152 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH nprl3 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Epilepsy, familial focal, with variable foci 3 617118
    DISEASE ASSOCIATED WITH nprl3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cellular response to amino acid starvation (more)
    Cellular Component GATOR1 complex (more)
    Molecular Function molecular_function (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005365 (1)
  • InterPro:IPR008979 (1)
  • Pfam:PF03666 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nprl3-201 (1) 2958
    aberrant processed transcript nprl3-202 (1) 516
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM nprl3 No data available
    MARKER RELATIONSHIPS
    nprl3 Contained in: [BAC] CH211-5K11 (1) (order this), CH211-287M16 (1) (order this), XX-BY187G17
    nprl3 Encodes: [EST] eu985 (1), fb68d06
    [cDNA] MGC:136620 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001025534 (1) 2503 bp
    Genomic GenBank:AL929130 (1) 149702 bp
    Select Tool
    Polypeptide UniProtKB:F1QH43 (1) 581 aa
    Sequence Clusters UniGene:48018 (1)
    Sequence Information (all 29)
    ORTHOLOGY for nprl3 ( Chr: 3 )
    CITATIONS (21)