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ZIRC
ZFIN ID: ZDB-GENE-030131-1107
Gene Name: zgc:77849
Gene Symbol: zgc:77849    Nomenclature History

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Previous Names: fb59e09, wu:fb59e09

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Involved in cellular response to xenobiotic stimulus. Orthologous to human C16orf72 (chromosome 16 open reading frame 72).
Genome Resources: Alliance (1),  Gene:322387 (1),  Ensembl(GRCz11):ENSDARG00000012458 (1)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56060]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13623 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19421 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:77849 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:77849 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cellular response to xenobiotic stimulus (more)
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR029196 (1)
  • InterPro:IPR040308 (1)
  • Pfam:PF15251 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:77849-201 (1)    Ensembl 1906
    ncRNA zgc:77849-002 (1)    Ensembl 856
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:77849 No data available
    MARKER RELATIONSHIPS
    zgc:77849 Contained in: [BAC] CH211-160D14 (1) (order this), DKEY-20I6 (1) (order this)
    zgc:77849 Encodes: [EST] fb59e09
    [cDNA] MGC:56060 (1) (order this), MGC:77849 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199602 (1) 1930 bp
    Genomic GenBank:BX005261 (1) 228767 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0R4I9A2 (1) 265 aa
    Sequence Clusters UniGene:76484 (1)
    Sequence Information (all 20)
    ORTHOLOGY for zgc:77849 ( Chr: 1 )
    CITATIONS (17)