header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-020812-1
Gene Name: caspase b
Gene Symbol: caspb
Sequence Ontology ID : SO:0001217

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: caspy2, casp19a (1), zgc:109807

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits cysteine-type endopeptidase activity. Involved in positive regulation of apoptotic process. Predicted to localize to the cytoplasm. Is expressed in several structures, including digestive  ...
GENE EXPRESSION
All Expression Data: 12 figures from 5 publications
Directly Submitted Expression Data: 6 figures (5 images) from Thisse et al., 2004 [MGC:109807]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH caspb HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH caspb VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process defense response to bacterium (more)
Cellular Component cytoplasm (more)
Molecular Function cysteine-type endopeptidase activity (more)
GO Terms (all 15)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA caspb-201 (1) 1819
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM caspb No data available
MARKER RELATIONSHIPS
caspb Contained in: [BAC] CH211-114L13 (1) (order this)
caspb Encodes: [EST] fl61f11
[cDNA] MGC:109807 (1) (order this), MGC:191673 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_152884 (1) 1812 bp
Genomic GenBank:BX469930 (1) 183380 bp
Select Tool
Polypeptide UniProtKB:Q4U0E2 (1) 404 aa
Sequence Clusters UniGene:81726 (1)
Sequence Information (all 24)
ORTHOLOGY for caspb ( Chr: 1 )
CITATIONS (32)