ZFIN ID: ZDB-GENE-020708-3
Gene Name: thrombospondin 3a
Gene Symbol: thbs3a
Sequence Ontology ID : SO:0000704

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Previous Names: thbs3, Tsp-3a (1), zgc:103461

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 7 figures (15 images) from Thisse et al., 2004 [MGC:103461]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH thbs3a HUMAN ORTHOLOG No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process mesenchymal to epithelial transition (more)
Cellular Component extracellular region (more)
Molecular Function calcium ion binding (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000742 (1)
  • InterPro:IPR001791 (1)
  • InterPro:IPR001881 (1)
  • InterPro:IPR003367 (1)
  • InterPro:IPR008859 (1)
  • InterPro:IPR009030 (1)
  • InterPro:IPR013032 (1)
  • InterPro:IPR013320 (1)
  • InterPro:IPR017897 (1)
  • InterPro:IPR018097 (1)
  • InterPro:IPR024665 (1)
  • InterPro:IPR028507 (1)
  • InterPro:IPR028974 (1)
  • InterPro:IPR037349 (1)
  • PROSITE:PS01186 (1)
  • PROSITE:PS01187 (1)
  • PROSITE:PS50026 (1)
  • PROSITE:PS51234 (1)
  • PROSITE:PS51236 (1)
  • Pfam:PF02412 (1)
  • Pfam:PF05735 (1)
  • Pfam:PF07645 (1)
  • Pfam:PF11598 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA thbs3a-001 (1) 3279
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM thbs3a No data available
    MARKER RELATIONSHIPS
    thbs3aContained in: [BAC] DKEY-7J14 (1) (order this), DKEY-181D19 (1) (order this)
    thbs3aEncodes: [cDNA] MGC:103461 (1) (order this), MGC:192765 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_173225 (1) 3282bp
    Genomic GenBank:BX005234 (1) 222420bp Blast at MegaBLAST
    Polypeptide UniProtKB:B2GSX1 (1) 962aa
    Sequence Clusters UniGene:76211 (1)
    Sequence Information (all 19)
    OTHER thbs3a GENE PAGES
  • Alliance (1)
  • Gene:252849 (1)
  • VEGA:OTTDARG00000021106 (1)
  • Ensembl(GRCz11):ENSDARG00000077641 (1)
  • ORTHOLOGY for thbs3a (Chr: 16)
    CITATIONS (25)