Gene

u2af1

ID
ZDB-GENE-020419-1
Name
U2 small nuclear RNA auxiliary factor 1
Symbol
u2af1 Nomenclature History
Previous Names
  • CHUNP6860
  • zgc:111896
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to have pre-mRNA 3'-splice site binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to localize to U2AF complex and spliceosomal complex. Orthologous to human U2AF1 (U2 small nuclear RNA auxiliary factor 1).
Genome Resources
Note
None
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
No data available
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
5 figures from 4 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With u2af1 Human Ortholog
No data available
Associated With u2af1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Domain IPR000571 Zinc finger, CCCH-type
Domain IPR003954 RNA recognition motif domain, eukaryote
Family IPR009145 U2 auxiliary factor small subunit
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Domain Details Per Protein
Protein Length Nucleotide-binding alpha-beta plait domain superfamily RNA-binding domain superfamily RNA recognition motif domain RNA recognition motif domain, eukaryote U2 auxiliary factor small subunit Zinc finger, CCCH-type
UniProtKB:F1RB94 250
UniProtKB:Q4G0A1 250
UniProtKB:Q8JHJ3 249
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Gene Tree
Ensembl
Citations