ZFIN ID: ZDB-GENE-020107-3
Gene Name: protein tyrosine phosphatase receptor type Sa
Gene Symbol: ptprsa    Nomenclature History

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Previous Names: ptprs, RPTP[s] (1), zf-RPTP[s] (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 22 Mapping Details/Browsers
Description: Predicted to have protein tyrosine phosphatase activity. Involved in olfactory bulb development. Predicted to localize to integral component of membrane. Is expressed in head and nervous system. Orthologous to human PTPRS (protein tyrosine phosphatase receptor type S).
Genome Resources: Alliance (1),  Gene:140820 (1), 
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Larval:Days 7-13 (168.0h-14d, 4.5mm, 8 teeth)
 
High Throughput Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la014239Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la014243Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa10109 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa13576 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa17813 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-ptprsa N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ptprsa HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ptprsa VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process olfactory bulb development (more)
    Cellular Component integral component of membrane (more)
    Molecular Function hydrolase activity (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ptprsa-202 (1)    Ensembl 508
    ptprsa-203 (1)    Ensembl 6210
    Browsers: NCBI
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ptprsa
    Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
    Tg(ompb:Rno.Vamp2-EGFP,ompb:ptprsa_C1556S) ompb EGFPptprsa Danio rerioRattus norvegicus 3 3
    MARKER RELATIONSHIPS
    ptprsa Contained in: [BAC] DKEY-269H2 (1) (order this)
    [Fosmid] CH1073-121B13 (1), CH1073-365N21 (1), CH1073-386G6 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_021469479 (1)
    Genomic GenBank:CU137651 (1) 151312 nt
    Select Tool
    Polypeptide UniProtKB:F1QJW2 (1) 1918 aa
    Sequence Information (all 94)
    ORTHOLOGY for ptprsa ( Chr: 22 )
    CITATIONS (24)