ZFIN ID: ZDB-GENE-010501-3
Gene Name: polybromo 1, like
Gene Symbol: pbrm1l    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: pb1 (1), zgc:100857, zgc:113882

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have chromatin binding activity. Predicted to be involved in ATP-dependent chromatin remodeling; nucleosome disassembly; and transcription elongation from RNA polymerase II promoter. Predicted to localize to RSC-type complex.
Genome Resources: Alliance (1),  Gene:445141 (1),  Ensembl(GRCz11):ENSDARG00000077038 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2005 [eu469]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa20804 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33952 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-pbrm1l N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pbrm1l HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pbrm1l VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process chromatin remodeling (more)
    Cellular Component nucleus (more)
    Molecular Function chromatin binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA pbrm1l-202 (1)    Ensembl 5449
    pbrm1l-203 (1)    Ensembl 5611
    ncRNA pbrm1l-003 (1)    Ensembl 767
    pbrm1l-005 (1)    Ensembl 754
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pbrm1l No data available
    MARKER RELATIONSHIPS
    pbrm1l Contained in: [BAC] DKEY-7K24 (1) (order this), DKEY-172F5 (1) (order this)
    pbrm1l Encodes: [EST] eu469 (1)
    [cDNA] MGC:100857 (1), MGC:113882 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001003535 (1) 5481 nt
    Genomic GenBank:BX546446 (1) 196818 nt
    Select Tool
    Polypeptide UniProtKB:A0A2R8QIG9 (1) 1629 aa
    Sequence Information (all 26)
    ORTHOLOGY for pbrm1l ( Chr: 6 )
    CITATIONS (21)