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General Information
ZIRC
ZFIN ID: ZDB-GENE-010412-1
Gene Name: SIX homeobox 2a
Gene Symbol: six2a
Sequence Ontology ID : SO:0001217

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Previous Names: six2.1, wu:fj04e08, zgc:91945

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and transcription regulatory region sequence-specific DNA binding activity. Involved in pronephros development.  ...
GENE EXPRESSION
All Expression Data: 9 figures from 3 publications
Directly Submitted Expression Data: 6 figures (13 images) from Thisse et al., 2004 [MGC:91945]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
DISEASE ASSOCIATED WITH six2a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH six2a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process pronephros development (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 11)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA six2a-201 (1) 1609
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM six2a No data available
MARKER RELATIONSHIPS
six2a Contained in: [BAC] DKEY-103L3 (1) (order this)
six2a Encodes: [EST] fj04e08 (1)
[cDNA] MGC:91945 (1) (order this), MGC:191825 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_131783 (1) 1635 bp
Genomic GenBank:BX537274 (1) 151298 bp
Select Tool
Polypeptide UniProtKB:Q98TH1 (1) 288 aa
Sequence Clusters UniGene:8955 (1)
Sequence Information (all 17)
ORTHOLOGY for six2a ( Chr: 13 )
CITATIONS (28)