Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-010302-3
Gene Name: alanine-glyoxylate aminotransferase b
Gene Symbol: agxtb
Previous Names: agxt, wu:fb57d01, zgc:65930
Location: Chr: 2   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: Fig. T2 from Lam et al., 2008
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: sa13526
PHENOTYPE
Phenotype of Human Orthologue OMIM Phenotype ID
Hyperoxaluria, primary, type 1 259900
GENE ONTOLOGY
Ontology GO Term
Biological Process cellular response to estrogen stimulus (more)
Cellular Component mitochondrion (more)
Molecular Function alanine-glyoxylate transaminase activity (more)
GO Terms (all 13)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000192 (1)
  • InterPro:IPR015421 (1)
  • InterPro:IPR015422 (1)
  • InterPro:IPR015424 (1)
  • InterPro:IPR020578 (1)
  • InterPro:IPR024169 (1)
  • PROSITE:PS00595 (1)
  • Pfam:PF00266 (1)
  • EC:2.6.1.51 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA agxtb-001 (1) 1592
    ncRNA agxtb-002 (1) 634
    agxtb-003 (1) 931
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM agxtb No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    agxtb Contained in: [BAC] CH211-105D4 (1) (order this)
    agxtb Contains: [SNP] rs3727622 (1), rs3727623 (1), rs3727624 (1), rs3727625 (1), rs3727626 (1)
    agxtb Encodes: [EST] fb57d01
    [cDNA] MGC:65930 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213162 (1) 1584 bp
    Genomic GenBank:BX897733 (1) 115031 bp
    Select Tool
    Polypeptide UniProtKB:Q6PHK4 (1) 423 aa
    Sequence Clusters UniGene:1970 (1)
    Sequence Information (all 14)
    OTHER agxtb GENE PAGES
  • Gene:79378 (1)
  • VEGA:OTTDARG00000019646 (1)
  • Ensembl(Zv9):ENSDARG00000018478 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish agxtb 2  
    Human AGXT 2 (2q37.3)
  • OMIM:604285
  • Gene:189
  • Mouse Agxt 1 ( 47.00 cM)
  • MGI:1329033
  • Gene:11611
  • Orthology Details
    CITATIONS (18)