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ZIRC
ZFIN ID: ZDB-GENE-001221-1
Gene Name: nuclear respiratory factor 1
Gene Symbol: nrf1
Sequence Ontology ID : SO:0001217

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Previous Names: nrf, nrl (1), not really finished

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
AUTOMATED DESCRIPTION
Predicted to have RNA polymerase II proximal promoter sequence-specific DNA binding activity and core promoter sequence-specific DNA binding activity. Involved in several processes, including  ...
GENE EXPRESSION
All Expression Data: 5 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55915]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi399Tg Transgenic Insertion Intron 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la028975Tg Transgenic Insertion Unknown Unknown DNA
    sa9538 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20242 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33432 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • DISEASE ASSOCIATED WITH nrf1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nrf1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cellular response to cold (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR019525 (1)
  • InterPro:IPR019526 (1)
  • InterPro:IPR039142 (1)
  • Pfam:PF10491 (1)
  • Pfam:PF10492 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nrf1-201 (1) 2933
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM nrf1 No data available
    MARKER RELATIONSHIPS
    nrf1 Contained in: [BAC] RP71-3C13 (1) (order this)
    nrf1 Encodes: [cDNA] MGC:55915 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131680 (1) 2870 bp
    Genomic GenBank:AL590150 (1) 148777 bp
    Select Tool
    Polypeptide UniProtKB:Q90X44 (1) 514 aa
    Sequence Clusters UniGene:79816 (1)
    Sequence Information (all 15)
    ORTHOLOGY for nrf1 ( Chr: 4 )
    CITATIONS (47)