ZFIN ID: ZDB-GENE-001206-2
Gene Name: ladybird homeobox 2
Gene Symbol: lbx2
Sequence Ontology ID : SO:0000704

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Previous Names: lbx1, fc26c12, lbx1h (1), wu:fc26c12, zgc:92170 (1)

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(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 7 figures from 7 publications
Wild-type Stages, Structures: Gastrula:75%-epiboly (8.0h-9.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
  adaxial cell, epaxial myotome region, fast muscle cell, fin myoblast (all 15) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hu3336 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • ihb39 Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC, ZKO consortium) (order this)
  • ihb40 Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC, ZKO consortium) (order this)
  • ko11 Indel Exon 1 Frameshift, Premature Stop TALEN
    sa605 Point Mutation Unknown Splice Site ENU
    Targeting reagents: CRISPR1-lbx2 (1), MO1-lbx2 (1), MO2-lbx2 (1), MO3-lbx2 (1), MO4-lbx2 (1) (all 10) expand
    PHENOTYPE
    Data: 4 figures from Ochi et al., 2009
    Observed in: adaxial cell, fast muscle cell myofibril, fast muscle cell, muscle pioneer myofibril (all 6) expand
    DISEASE ASSOCIATED WITH lbx2 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process muscle cell development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000047 (1)
  • InterPro:IPR001356 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR017970 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS50071 (1)
  • Pfam:PF00046 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA lbx2-001 (1) 1815
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM lbx2 No data available
    MARKER RELATIONSHIPS
    lbx2Contained in: [BAC] CH211-207O21 (1) (order this)
    lbx2Encodes: [EST] bn0aa085zh02 (1), fc26c12
    [cDNA] MGC:92170 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007134 (1) 1764bp
    Genomic GenBank:AL831789 (1) 217649bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q804R0 (1) 257aa
    Sequence Clusters UniGene:27181 (1)
    Sequence Information (all 15)
    OTHER lbx2 GENE PAGES
  • Alliance (1)
  • Gene:64276 (1)
  • VEGA:OTTDARG00000001942 (1)
  • Ensembl(GRCz10):ENSDARG00000025131 (1)
  • ORTHOLOGY for lbx2 (Chr: 14)
    CITATIONS (43)