ZFIN ID: ZDB-GENE-000804-1
Gene Name: period circadian clock 3
Gene Symbol: per3
Sequence Ontology ID : SO:0000704

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Previous Name: period3 (1)

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 17 figures from 10 publications
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa21969 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41903 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: Fig. 3 from Pierce et al., 2008
    Observed in:
    DISEASE ASSOCIATED WITH per3 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    advanced sleep phase syndrome 3 ?Advanced sleep phase syndrome, familial, 3 616882
    DISEASE ASSOCIATED WITH per3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process circadian regulation of gene expression (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000014 (1)
  • InterPro:IPR013655 (1)
  • InterPro:IPR015524 (1)
  • InterPro:IPR022728 (1)
  • InterPro:IPR035965 (1)
  • PROSITE:PS50112 (1)
  • Pfam:PF08447 (1)
  • Pfam:PF12114 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ottdart00000061541 (1) 11018
    ncRNA ottdart00000062306 (1) 1120
    per3-003 (1) 406
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM per3
    MARKER RELATIONSHIPS
    per3Contained in: [BAC] CH211-138E4 (1) (order this), DKEY-264D12 (1) (order this)
    per3Encodes: [cDNA] MGC:193569 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131584 (1) 4809bp
    Genomic GenBank:CR762484 (1) 248134bp Blast at MegaBLAST
    Polypeptide UniProtKB:B3DGP6 (1) 1281aa
    Sequence Clusters UniGene:82317 (1)
    Sequence Information (all 16)
    OTHER per3 GENE PAGES
  • Alliance (1)
  • Gene:58107 (1)
  • VEGA:OTTDARG00000042601 (1)
  • Ensembl(GRCz11):ENSDARG00000010519 (2)
  • ORTHOLOGY for per3 (Chr: 11)
    CITATIONS (54)