ZFIN ID: ZDB-GENE-000627-2
Gene Name: adenosine deaminase RNA specific B1a
Gene Symbol: adarb1a
Sequence Ontology ID : SO:0000704

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Previous Names: ADAR2 (1), adarb1, RED1

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have double-stranded RNA adenosine deaminase activity, double-stranded RNA binding activity, and tRNA-specific adenosine deaminase activity; involved in several processes, including  ...
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2005 [eu111]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 6 (144.0h-168.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la014151Tg Transgenic Insertion Unknown Unknown DNA
sa14549 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37456 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 5 figures from Li et al., 2014
    Observed in:
    DISEASE ASSOCIATED WITH adarb1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH adarb1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process anterior lateral line development (more)
    Molecular Function adenosine deaminase activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002466 (1)
  • InterPro:IPR014720 (1)
  • PROSITE:PS50137 (1)
  • PROSITE:PS50141 (1)
  • Pfam:PF00035 (1)
  • Pfam:PF02137 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA adarb1a-201 (1) 5959
    adarb1a-202 (1) 5944
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM adarb1a No data available
    MARKER RELATIONSHIPS
    adarb1aContained in: [BAC] DKEY-170G11 (1) (order this)
    adarb1aEncodes: [EST] eu111 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131610 (1) 5959bp
    Genomic GenBank:CR847870 (1) 237985bp Blast at MegaBLAST
    Polypeptide UniProtKB:A5WUX1 (1) 720aa
    Sequence Clusters UniGene:10298 (1)
    Sequence Information (all 29)
    OTHER adarb1a GENE PAGES
  • Alliance (1)
  • Gene:58134 (1)
  • VEGA:OTTDARG00000019241 (1)
  • Ensembl(GRCz11):ENSDARG00000041609 (2)
  • ORTHOLOGY for adarb1a (Chr: 22)
    CITATIONS (25)