ZFIN ID: ZDB-GENE-000616-4
Gene Name: apoptotic peptidase activating factor 1
Gene Symbol: apaf1
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:136543

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: Fig. 2 from Jin et al., 2013
Wild-type Stages, Structures: Larval:Protruding-mouth (72.0h-96.0h, 3.5mm) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH apaf1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH apaf1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process apoptotic process (more)
Cellular Component apoptosome (more)
Molecular Function ADP binding (more)
GO Terms (all 13)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001315 (1)
  • InterPro:IPR001680 (1)
  • InterPro:IPR002182 (1)
  • InterPro:IPR011029 (1)
  • InterPro:IPR015943 (1)
  • InterPro:IPR017251 (1)
  • InterPro:IPR017986 (1)
  • InterPro:IPR019775 (1)
  • InterPro:IPR020472 (1)
  • InterPro:IPR027417 (1)
  • InterPro:IPR036322 (1)
  • InterPro:IPR036388 (1)
  • InterPro:IPR037963 (1)
  • PROSITE:PS00678 (1)
  • PROSITE:PS50082 (1)
  • PROSITE:PS50209 (1)
  • PROSITE:PS50294 (1)
  • Pfam:PF00400 (1)
  • Pfam:PF00619 (1)
  • Pfam:PF00931 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA apaf1-001 (1) 4533
    ncRNA apaf1-002 (1) 1995
    apaf1-003 (1) 647
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM apaf1 No data available
    MARKER RELATIONSHIPS
    apaf1Contained in: [BAC] CH211-173P13 (1) (order this)
    apaf1Encodes: [cDNA] MGC:92565 (1), MGC:136543 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131608 (1) 3786bp
    Genomic GenBank:CT025647 (1) 113990bp
    Select Tool
    Polypeptide UniProtKB:A5WVJ8 (1) 1261aa
    Sequence Clusters UniGene:78833 (1)
    Sequence Information (all 21)
    OTHER apaf1 GENE PAGES
  • Alliance (1)
  • Gene:58131 (1)
  • VEGA:OTTDARG00000024044 (1)
  • Ensembl(GRCz11):ENSDARG00000021239 (2)
  • ORTHOLOGY for apaf1 (Chr: 4)
    CITATIONS (58)