header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-000607-75
Gene Name: NOC2-like nucleolar associated transcriptional repressor
Gene Symbol: noc2l
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: DKFZP564C186-like (1), id:ibd5110 (1), un-named hi3773, unm hi3773, zgc:195326 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have histone binding activity; repressing transcription factor binding activity; and transcription corepressor activity. Predicted to be involved in negative regulation of histone  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Kudoh et al., 2001 [ibd5110]
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE
Data: 2 figures from 2 publications
Observed in:
DISEASE ASSOCIATED WITH noc2l HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH noc2l VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process negative regulation of histone acetylation (more)
Cellular Component Noc1p-Noc2p complex (more)
Molecular Function histone binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005343 (1)
  • InterPro:IPR016024 (1)
  • Pfam:PF03715 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA noc2l-202 (1) 2876
    noc2l-203 (1) 823
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM noc2l No data available
    MARKER RELATIONSHIPS
    noc2lContained in: [BAC] DKEY-98J1 (1) (order this)
    noc2lEncodes: [EST] ibd5110 (order this)
    [cDNA] MGC:195326 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003830 (1) 2318bp
    Genomic GenBank:AL845437 (1) 239084bp Blast at MegaBLAST
    Polypeptide UniProtKB:B3DKM2 (1) 754aa
    Sequence Clusters UniGene:76891 (1)
    Sequence Information (all 31)
    ORTHOLOGY for noc2l (Chr: 23)
    CITATIONS (27)