ZFIN ID: ZDB-GENE-000406-9
Gene Name: mesoderm posterior ba
Gene Symbol: mespba    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: mesp-b, mespb

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in several processes, including circulatory system development; response to retinoic acid; and somitogenesis. Predicted to localize to nucleus. Is expressed in paraxial mesoderm; presumptive paraxial mesoderm; segmental plate; somite; and somite 11. Orthologous to human MESP1 (mesoderm posterior bHLH transcription factor 1).
Genome Resources: Alliance (1),  Gene:58070 (1),  Ensembl(GRCz11):ENSDARG00000030347 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
kt1004 Indel Unknown Unknown TALEN
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-mespba N/A 5
MO2-mespba N/A 1
TALEN1-mespba 1
DISEASE ASSOCIATED WITH mespba HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH mespba VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process response to retinoic acid (more)
Cellular Component nucleus (more)
Molecular Function DNA-binding transcription factor activity (more)
GO Terms (all 16)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA mespba-201 (1)    Ensembl 851
mespba-202 (1)    Ensembl 1032
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM mespba
Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
Tg(hsp70l:mespba-MYC) hsp70l mespbaMYC Danio rerio 1 2
Tg(UAS:mespba) UAS mespba Danio rerio 1 1
MARKER RELATIONSHIPS
mespba Contained in: [BAC] CH211-276A23 (1)
mespba Encodes: [cDNA] MGC:195190 (1), MGC:195204 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_131552 (1) 930 nt
Genomic GenBank:CR848709 (1) 153072 nt
Select Tool
Polypeptide UniProtKB:B3DKC1 (1) 236 aa
Sequence Information (all 15)
ORTHOLOGY for mespba ( Chr: 7 )
CITATIONS (64)