ZFIN ID: ZDB-GENE-000329-2
Gene Name: homeobox B7a
Gene Symbol: hoxb7a
Sequence Ontology ID : SO:0000704

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Previous Names: hoxb7, fc39g02, wu:fc39g02, z-139

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
All Expression Data: 10 figures from 9 publications
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la015134Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: Fig. S5 from Rochtus et al., 2015
    Observed in:
    DISEASE ASSOCIATED WITH hoxb7a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hoxb7a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process multicellular organism development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001356 (1)
  • InterPro:IPR001827 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR017970 (1)
  • InterPro:IPR017995 (1)
  • InterPro:IPR020479 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS00032 (1)
  • PROSITE:PS50071 (1)
  • Pfam:PF00046 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hoxb7a-001 (1) 903
    ncRNA hoxb7a-002 (1) 865
    hoxb7a-003 (1) 832
    mRNA hoxb7a-004 (1) 487
    ottdart00000001815 (1) 1337
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM hoxb7a No data available
    MARKER RELATIONSHIPS
    hoxb7aContained in: [BAC] CH211-72A16 (1) (order this)
    [PAC] BUSM1-254O17 (1) (order this)
    hoxb7aEncodes: [EST] fc39g02
    [cDNA] MGC:194760 (1), MGC:194765 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001115091 (1) 1258bp
    Genomic GenBank:BX927395 (1) 152987bp
    Select Tool
    Polypeptide UniProtKB:B3DJ48 (1) 227aa
    Sequence Clusters UniGene:75790 (1)
    Sequence Information (all 25)
    OTHER hoxb7a GENE PAGES
  • Alliance (1)
  • Gene:58044 (1)
  • VEGA:OTTDARG00000001701 (1)
  • VEGA:OTTDARG00000019820 (1)
  • Ensembl(GRCz11):ENSDARG00000056030 (1)
  • ORTHOLOGY for hoxb7a (Chr: 3)
    CITATIONS (48)