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General Information
ZIRC
ZFIN ID: ZDB-GENE-000208-23
Gene Name: collagen, type XI, alpha 2
Gene Symbol: col11a2
Sequence Ontology ID : SO:0001217

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Previous Name: col11a1 (1)

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have extracellular matrix structural constituent. Involved in cartilage morphogenesis. Predicted to localize to the collagen trimer; extracellular matrix; and extracellular space. Human  ...
DISEASE ASSOCIATED WITH col11a2 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
autosomal dominant nonsyndromic deafness 13 Deafness, autosomal dominant 13 601868
autosomal recessive nonsyndromic deafness 53 Deafness, autosomal recessive 53 609706
fibrochondrogenesis Fibrochondrogenesis 2 614524
otospondylomegaepiphyseal dysplasia Otospondylomegaepiphyseal dysplasia, autosomal recessive 215150
Stickler syndrome Otospondylomegaepiphyseal dysplasia, autosomal dominant 184840
DISEASE ASSOCIATED WITH col11a2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cartilage morphogenesis (more)
Cellular Component collagen trimer (more)
Molecular Function extracellular matrix structural constituent (more)
GO Terms (all 9)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA col11a2-001 (1) 4052
col11a2-201 (1) 6965
col11a2-202 (1) 1565
col11a2-203 (1) 5476
col11a2-204 (1) 6544
GENE PRODUCT DESCRIPTION No description available
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM col11a2 No data available
MARKER RELATIONSHIPS
col11a2 Contained in: [BAC] CH73-198N16 (1) (order this), CH211-51F10 (1) (order this)
[Fosmid] CH1073-455J15 (1) (order this)
[PAC] BUSM1-12F11 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001079992 (1) 5345 bp
Genomic GenBank:BX510994 186973 bp
Select Tool
Polypeptide UniProtKB:Q1LWX5 (1) 1877 aa
Sequence Clusters UniGene:108681 (1)
Sequence Information (all 50)
ORTHOLOGY for col11a2 ( Chr: 19 )
CITATIONS (37)