ZFIN ID: ZDB-GENE-000208-18
Gene Name: uroporphyrinogen decarboxylase
Gene Symbol: urod
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fc43e09 (1), yqe, yquem (1)

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 11 figures from 5 publications
Directly Submitted Expression Data: 6 figures (5 images) from Rauch et al., 2003 [fc43e09]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE
Data: 4 figures from 4 publications
Observed in:
DISEASE ASSOCIATED WITH urod HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
porphyria cutanea tarda Porphyria cutanea tarda 176100
Porphyria, hepatoerythropoietic 176100
GENE ONTOLOGY
Ontology GO Term
Biological Process porphyrin-containing compound metabolic process (more)
Cellular Component cytoplasm (more)
Molecular Function uroporphyrinogen decarboxylase activity (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000257 (1)
  • InterPro:IPR006361 (1)
  • InterPro:IPR038071 (1)
  • PROSITE:PS00906 (1)
  • PROSITE:PS00907 (1)
  • Pfam:PF01208 (1)
  • EC:4.1.1.37 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA urod-001 (1) 1292
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM urod
    MARKER RELATIONSHIPS
    urodContained in: [BAC] CH73-38P6 (1) (order this)
    urodContains: [STS] unp1690
    urodEncodes: [EST] fc43e09 (1) (order this)
    [cDNA] MGC:123153 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131347 (1) 1414bp
    Genomic GenBank:CU571330 (1) 133116bp
    Select Tool
    Polypeptide UniProtKB:Q568V5 (1) 402aa
    Sequence Clusters UniGene:2166 (1)
    Sequence Information (all 18)
    OTHER urod GENE PAGES
  • Alliance (1)
  • Gene:30617 (1)
  • VEGA:OTTDARG00000029046 (1)
  • Ensembl(GRCz10):ENSDARG00000006818 (1)
  • ORTHOLOGY for urod (Chr: 2)
    CITATIONS (47)