Genomic Feature

ecn5

ID
ZDB-ALT-211116-2
Name
ecn5
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Zhen-Yu Du Lab
Current Source
China Zebrafish Resource Center (CZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 12: 17199269 - 17199273 (GRCz11) (1) Details
Nucleotide change
TCCAG/-
Variant Notes
Between the 39bp and 43bp of the wild-type lipf coding sequence, CTGGA is  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted in Exon 1 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
GCTCATTCAACTGAAGTGATAAAATCCTGTAAAATGTAAAAAAAAATTCAGAGACAGTTAAGAGACCTACTACCCTAAAATGGCACCGAATAGTAGCATCCGAATTGTGTTTCTGCTCATTTTAAATAAGTAGTTTTAACAAGCAGCAAACATAAATTTTTAGTGTATGCTAAGCTGTTATAGTGATTCGAAATACATTACATACTATCAGAACATACGCTTTTGCTATATAAATAGATTATTTTTGTTAGTTTTCAACTCATGTTTGAATGTTATCCAGACATTGTTATTTGCCTTTTTTGAGATACGCCTTTTTTTTTGCCTTTTTTGAGATACACATTTTGCCACAAAAGGGCAAAACCTGAACTTATTGCATAATAAAGTTAGCACTCAATTTGCCTAAATGTGTCATATTACAGGCTATATATACTTACAATGTTCATGTTAACTTCGGGGTCCAATCCTGTCCCATCCAGAGCCGACTGGCCATACTGAACCAG
TCCAG/- ATGTAAGTATTACCAAAGACAACACCAGCCATGACATCTTTCTGTTGAATGCAGAAAAAAAAAAAACATACAGAATATCTCAACACACACTATACAAAATAGTTTAAAAGCTATATGGTTATCTTTTGCAGCAATCAGTTCACATGTTGCCCAATATGCACCTTTTGACTCTAAAGTAAGCATACCATAAAAAACACAAGGTGCAGCAAAATCCTTGTTTGCTCAGACAAAATAACCGGTCAAAGTTATTATTGCTAAACACAGTGGTTTATGATATCAGGTTGGAAAATGTTCACCTTTTTATTTACTTAAATGTGAACAATCCTGACATAATGAAAATTGTATTTGGGTCCACTTTAATTATGCATCATATCGATAAAGTAAGGTTTAATTTTACAACTCAGCGTTCACTCAAAGAAAAAGTAATTCAAGTAGCACATCTGAATGGTTTTAAATGAGTTTTTTTTACTTAAAGAACGACTTTTAGAACAATGCAAGAT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations