Genomic Feature

ja52

ID
ZDB-ALT-151102-4
Name
ja52
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Fukada Lab (Closed)
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 7: 7420083 - 7420095 (GRCz11) (1) Details
Nucleotide change
AGATTCTCGCACA/-
Variant Notes
13bp deletion in exon1 of six7
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
13 bp deleted in Exon 1 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TAATTTGATTCAACTAAAAAATTTTTTTTACATTGTACATGTAGATATTACTATTTTTAAACAATCCCCAGCCCCAAATGACATGATTTGAATCTTTTTCCGTAAGTTGCACTACTTCAAGTGTAGTTTCAGTACTTTTTGGTCTCACCTTAAAGCAGTGTGTCTTCTGCTCTCCATCCCAGATTGTCCTCGGCAGGGGGAACTTCTTACGGATGCGGTACTTCTCTACCGGGCCGAGTGGTCTGCCCCTCAGGCGCTCCGCCTCCCGGTAATGCGCGTCCAGCCACAGGTCCTGCAGTTTAGCGTGAGATTCGCGGGTAAACCGGTGACTCTGCAGAATCTGATAGAGCGCCTCGAAATTCCCGCCATGGAACGCGACGAGAGCCCGCGCGCGCATCACCGACTCATGACGGTTGAGCAACTCTCCGGCGGAACCGGGCACGGCGGCGGGCAGAGACCAGAGAAACCGGCCCAGGCGCTCGATATCTCCTGTTTCCTCG
AGATTCTCGCACA/- CTCGGGCCACCTGCTCAGGTGTGAACATCGGCAGAGGAAACATGGCTGTAGGTTTGTCTGACTAATTTGAAAACTCGCGCGCCCGTTTATACCAACGGCATTCCAGTGTGAGTAACGGACAACCAACGGCCTGAACGACTATATGAATGACTATATAGCTGACCGGTTATATAACGGAGCGACTGGATTCTCGGTAGGACGAATTCTCTGTAGGTCTTCTTAATGTGACATCTTCTAGTAAAGGAGGAGCAGCAGAAGTCAAGCCTATTTATAGAGAGATTCAATTAGCATCTTTGTGCTTGTTTTGAGGGGGATTATGCGCCTCGGTCATTAGCCTCTTAGCAGGGGGTTTGCTGTTCACGGAGGACACCGACTGGATGATCAGATTGTTAGACTCACTAACTGACTGACTGACACAGACTTCATTTCATTGTGCTGGATAAATGGACCTATTATGGAAACGACCCAGTCAGTGAAAACTGCTCTGCGCCTCCATATTT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations