Genomic Feature

ihb52

ID
ZDB-ALT-150424-1
Name
ihb52
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one insertion (1)
Protocol
embryos treated with
Lab of Origin
Yonghua Sun Lab
Current Source
China Zebrafish Resource Center (CZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Insertion
Variant Location
Chr 16: 53714438 - 53714439 (GRCz11) (1) Details
Nucleotide change
-/A
Variant Notes
Between 591 bp and 592 bp of the wildtype nod1 coding sequence, a “A” is  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp inserted from position 591 to 592 (1)
Transcript Consequence
None
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
ATAGCATGTACATGATATATTTCATTCCTCTGCGTACCACCAGAAGGAAGCCTGCGTACCACTAGTGGTACACGTTAGCAGCAGCGAAATCATGCACTGCCCTACACTTTTTTTTCATTTCAAGTAGATGTACTTACCTATCTTACCTTCCGTTTCAAACTTTAACAGTGCTTGGGAAATATTTGAAAAAAAACATATTCACATAAGGATGAATGATTTTTGTATCTCACTGTATGAGTGATTGTTCTGGTGCACTAATGTTATTGTTCCCCATCTCTACAGTCAGCAAATACTGTGAAAAGCTCCGATATGAGCTGGGAAGAGACACTCAGTTCATCACGTCCTACTCTAAAAGTGAGGAGACGCCGCTGGAGGATCTGTACACCGACACGCAGATGGAGCTCCTGAACGACACAGGAGAGAGTTTGGGATATTTACAGAATCTGGACCAACTTTTAGGAGATCATGGAGTCTTCAACCCACAGGCTGAGACTATCTTCA
-/A TCACGGGTGACGCTGGTGTTGGCAAATCAATCATGCTCCAGAAACTGCAGAATCTGTGGTCCAGACGAGAGCTGAAAACCCGCGCCAAATTCTTCTTCAAGTTCAGATGCAGAGCGTTCAGCGCCTTCAAGGAGACGGATGAGATCTCGCTGAAGGATTTAATCTTCAAGCACAACTGCTATCCAGATGGAGATCCAGATAATGAGGTGTTCGCCTACATCTTACGCTTCCCAGAAACTGTGGTGTTCACTTTCGACGGATACGATGAGCTCCAAATGGATTTCGATTTAGATAATGTGCCGGAAACGGTTTCCCCAGAAGAAAAAACACGACCGCTGCTGCTTCTAATGAATCTGCTCTGTGGGAAACTCCTGAAAGGCTCCAGGAAGATTCTGTCAGCAAGAAGTGGCACTGAAATCCAAAGCCGAGTGATTCGGAAGAAAGTGTTCCTGAAGGGATTTGCACCAGAACACCTGAAGAGATATTTAGCTTTGCATTTCC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations