- Title
-
Acute cold stress induces transient MuRF1 upregulation in the skeletal muscle of zebrafish
- Authors
- Tamai, S., Fujita, S.I., Komine, R., Kanki, Y., Aoki, K., Watanabe, K., Takekoshi, K., Sugasawa, T.
- Source
- Full text @ Biochem. Biophys. Res. Commun.
Fig. 1. Result of mRNA-seq. Eight RNA samples including both conditions and gender (cold/control [cont] and male/female; n = 2 for each). A. Principal component analysis displaying the projection of the sample onto a two-dimensional scatter plot by the first and second principal components. B. Heatmap presenting DEGs for each sample (control and cold_2h). C. Scatter plot presenting the mean log2 gene expression in the control and cold_2h groups. Green dots indicate excluded genes because of standard deviation > 1, blue dots indicate DEGs, and red dots indicate genes related to protein ubiquitination. D. Dot plots indicating the gene expression of trim63a, klhl38b, fbxo30a, and fbxo32. |
Fig. 2. The result of qPCR. A–D. Ubiquitin-related genes trim63a, klhl38b, fbxo30a, and fbxo32 (n = 10–16). E–F. Protein anabolic-related genes myod1 and synpo2la (n = 10–16). All data are presented as relative gene expression in comparison to the reference gene gapdh. In the post-hoc test, ∗p < 0.05 and ∗∗p < 0.01 indicated significance in the comparisons between different time points, and †p < 0.05 and ††p < 0.01 indicated significance in the comparison between the cold and control [cont] groups at each time point. |
Fig. 3. The result of western blotting A–C. Gel images of MuRF1 (trim63a), MAFbx (fbxo32), and gapdh. D and E. Time-course changes of MuRF1 and MAFbx (n = 6 for both conditions). All data are presented as relative gene expression in comparison to the reference protein gapdh. In the post-hoc test, ∗p < 0.05 indicated significance in the comparisons between different time points, and †p < 0.05 and ††p < 0.01 indicated significance in the comparisons between the cold and control [cont] groups at each time point. |