Gene

ptpdc1a

ID

ZDB-GENE-070112-632

Name

protein tyrosine phosphatase domain containing 1a

Symbol

ptpdc1a Nomenclature History

Previous Names

ptpdc1
zgc:158271

Type

protein_coding_gene

Location

Chr: 11 Mapping Details/Browsers

Description

Predicted to enable protein tyrosine phosphatase activity and protein tyrosine/serine/threonine phosphatase activity. Predicted to be involved in cilium assembly. Predicted to act upstream of or within cell projection organization and dephosphorylation. Orthologous to human PTPDC1 (protein tyrosine phosphatase domain containing 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ptpdc1a Human Ortholog

No data available

Associated With ptpdc1a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Active_site	IPR016130	Protein-tyrosine phosphatase, active site
Domain	IPR000340	Dual specificity phosphatase, catalytic domain
Domain	IPR000387	Tyrosine-specific protein phosphatases domain
Domain	IPR003595	Protein-tyrosine phosphatase, catalytic
Domain	IPR020422	Dual specificity protein phosphatase domain
Domain	IPR049573	Protein tyrosine phosphatase domain-containing protein 1, PTP domain
Family	IPR050561	Protein Tyrosine Phosphatase
Homologous_superfamily	IPR029021	Protein-tyrosine phosphatase-like

Domain Details Per Protein

Protein	Length	Dual specificity phosphatase, catalytic domain	Dual specificity protein phosphatase domain	Protein Tyrosine Phosphatase	Protein-tyrosine phosphatase, active site	Protein-tyrosine phosphatase, catalytic	Protein tyrosine phosphatase domain-containing protein 1, PTP domain	Protein-tyrosine phosphatase-like	Tyrosine-specific protein phosphatases domain
UniProtKB:A0A8M9QHQ6 InterPro	676
UniProtKB:F1QYQ8 InterPro	713
UniProtKB:A1L1R5 InterPro	713

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ptpdc1a-201 (1) Ensembl	Ensembl	3,349 nt	Select Tool ZFIN BLAST
mRNA	ptpdc1a-202 (1) Ensembl	Ensembl	780 nt	Select Tool ZFIN BLAST
mRNA	ptpdc1a-203 (1) Ensembl	Ensembl	369 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations