Gene

gtdc1

ID

ZDB-GENE-050417-8

Name

glycosyltransferase-like domain containing 1

Symbol

gtdc1 Nomenclature History

Previous Names

zgc:110568

Type

protein_coding_gene

Location

Chr: 9 Mapping Details/Browsers

Description

Involved in central nervous system development. Orthologous to human GTDC1 (glycosyltransferase like domain containing 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7158892 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 1 Figure from Aksoy et al., 2017
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With gtdc1 Human Ortholog

No data available

Associated With gtdc1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001296	Glycosyl transferase, family 1
Domain	IPR022701	tRNA-queuosine alpha-mannosyltransferase, N-terminal
Family	IPR051862	Glycosyltransferase-like domain-containing protein 1

Domain Details Per Protein

Protein	Length	Glycosyl transferase, family 1	Glycosyltransferase-like domain-containing protein 1	tRNA-queuosine alpha-mannosyltransferase, N-terminal
UniProtKB:A0A8M9QAN7 InterPro	433
UniProtKB:Q568B7 InterPro	433
UniProtKB:A0A8M6Z8E3 InterPro	432

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	gtdc1-201 (1) Ensembl	Ensembl		1,560 nt	Select Tool
mRNA	gtdc1-202 (1) Ensembl	Ensembl		4,267 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations