ZFIN is now using GRCz12tu for Genomic Data
Gene
yod1
- ID
- ZDB-GENE-050417-217
- Name
- YOD1 deubiquitinase
- Symbol
- yod1 Nomenclature History
- Previous Names
-
- fe01a10
- wu:fe01a10
- zgc:112182 (1)
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable cysteine-type deubiquitinase activity. Predicted to be involved in several processes, including ERAD pathway; endoplasmic reticulum unfolded protein response; and protein deubiquitination. Predicted to act upstream of or within proteolysis and response to unfolded protein. Predicted to be located in cytoplasm. Predicted to be active in cytosol and nucleus. Orthologous to human YOD1 (YOD1 deubiquitinase).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:112182 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Tse et al., 2009
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000626 | Ubiquitin-like domain |
| Domain | IPR003323 | OTU domain |
| Domain | IPR048857 | OTU1, Ubl domain |
| Domain | IPR057766 | OTU1-like, C-terminal C2H2-type zinc finger |
| Homologous_superfamily | IPR029071 | Ubiquitin-like domain superfamily |
| Homologous_superfamily | IPR038765 | Papain-like cysteine peptidase superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | OTU1-like, C-terminal C2H2-type zinc finger | OTU1, Ubl domain | OTU domain | Papain-like cysteine peptidase superfamily | Ubiquitin-like domain | Ubiquitin-like domain superfamily |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q567B1 | InterPro | 301 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers