Gene

slu7

ID

ZDB-GENE-041114-62

Name

SLU7 homolog, splicing factor

Symbol

slu7 Nomenclature History

Previous Names

fc94e11
wu:fc94e11
zgc:103640

Type

protein_coding_gene

Location

Chr: 14 Mapping Details/Browsers

Description

Predicted to contribute to second spliceosomal transesterification activity. Predicted to be involved in RNA splicing. Predicted to localize to spliceosomal complex. Orthologous to human SLU7 (SLU7 homolog, splicing factor).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:6909561 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With slu7 Human Ortholog

No data available

Associated With slu7 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR021715	Pre-mRNA-splicing factor SLU7 domain
Family	IPR039974	Pre-mRNA-splicing factor SLU7

Domain Details Per Protein

Protein	Length	Pre-mRNA-splicing factor SLU7	Pre-mRNA-splicing factor SLU7 domain
UniProtKB:F1RCR0 InterPro	619
UniProtKB:Q5U3F2 InterPro	571

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	slu7-201 (1) Ensembl	Ensembl		552 nt	Select Tool
mRNA	slu7-202 (1) Ensembl	Ensembl		2,551 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations