Gene

rpusd4

ID
ZDB-GENE-040801-238
Name
RNA pseudouridine synthase D4
Symbol
rpusd4 Nomenclature History
Previous Names
  • si:ch211-14i3.3
  • zgc:92006
Type
protein_coding_gene
Location
Chr: 11 Mapping Details/Browsers
Description
Predicted to have RNA binding activity and pseudouridine synthase activity. Predicted to be involved in pseudouridine synthesis and tRNA processing. Predicted to localize to mitochondrial matrix. Orthologous to human RPUSD4 (RNA pseudouridine synthase D4).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rpusd4 Human Ortholog
No data available
Associated With rpusd4 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR006145 Pseudouridine synthase, RsuA/RluA-like
Family IPR050188 RluA Pseudouridine Synthase
Homologous_superfamily IPR020103 Pseudouridine synthase, catalytic domain superfamily
Domain Details Per Protein
Protein Length Pseudouridine synthase, catalytic domain superfamily Pseudouridine synthase, RsuA/RluA-like RluA Pseudouridine Synthase
UniProtKB:Q6DBR0 358
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rpusd4-201 (1) Ensembl 1,748 nt
mRNA rpusd4-203 (1) Ensembl 1,077 nt
mRNA rpusd4-204 (1) Ensembl 1,383 nt
ncRNA rpusd4-002 (1) Ensembl 706 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations