Gene

prpf38a

ID
ZDB-GENE-040801-225
Name
pre-mRNA processing factor 38A
Symbol
prpf38a Nomenclature History
Previous Names
  • fa04h11
  • fc83e08
  • wu:fa04h11
  • wu:fc83e08
  • zgc:92059 (1)
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Predicted to be involved in mRNA splicing, via spliceosome. Predicted to localize to U2-type precatalytic spliceosome. Orthologous to human PRPF38A (pre-mRNA processing factor 38A).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With prpf38a Human Ortholog
No data available
Associated With prpf38a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR024767 Pre-mRNA-splicing factor 38, C-terminal
Family IPR005037 Pre-mRNA-splicing factor 38
Domain Details Per Protein
Protein Length Pre-mRNA-splicing factor 38 Pre-mRNA-splicing factor 38, C-terminal
UniProtKB:Q6DHU4 313
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA prpf38a-201 (1) Ensembl 1,308 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations