ZFIN Sequences for Gene: htt

ZFIN ID: ZDB-GENE-990415-131

ZFIN ID: ZDB-GENE-990415-131

SEQUENCE INFORMATION

Gene Name:	huntingtin
Gene Symbol:	htt

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_131018 (1)	10620 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_009292964 (1)	11265 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_009292966 (1)	11247 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_009292971 (1)	11220 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073907623 (1)	11202 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005160016 (1)	11058 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_009292973 (1)	11031 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073907825 (1)	11013 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01008126 (1)	12197 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AF052602 (1)	10619 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AF028731 (1)	392 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX511019 (2)	180744 nt	Select Tool MegaBLAST Ensembl
	GenBank:AL954671 (2)	142357 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR974461 (2)	27844 nt	Select Tool MegaBLAST Ensembl
	GenBank:AF052603	1017 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:JBMGRA010000001 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:A0A8M3AIT6 (1)	3184 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M3B295 (1)	3178 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M3AU50 (1)	3169 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:O42269 (1)	3121 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M2B6V6 (1)	3115 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M3AIU2 (1)	3106 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_571093 (1)	3121 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009291239 (1)	3184 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009291241 (1)	3178 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009291246 (1)	3169 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073763724 (1)	3163 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005160073 (1)	3115 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009291248 (1)	3106 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073763926 (1)	3100 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAC63983 (1)	3121 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAC05309 (1)	130 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAC63984 (1)	32 aa	Select Tool ZFIN BLAST NCBI BLAST

htt CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH211-89O9 (1)	Genomic	GenBank:BX511019	180744	Select Tool MegaBLAST Ensembl
[BAC] DKEY-21K13 (1)	Genomic	GenBank:CR974461	27844	Select Tool MegaBLAST Ensembl
[BAC] DKEY-180B4 (1)	Genomic	GenBank:AL954671	142357	Select Tool MegaBLAST Ensembl